Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925203.1_cds_XP_016473481.1_65605
CDS Infomation

[gene=LOC107795370] [db_xref=GeneID:107795370] [protein=phosphatidylinositol 3-kinase, root isoform isoform X2] [protein_id=XP_016473481.1] [location=join(54776..54826,55257..55415,55518..55727,56773..56951,57530..57677,58618..58713,59290..59425,59534..59655,61167..61361,61477..61647,61990..62127,62435..62589,62997..63140,63303..63450,63551..63688)] [gbkey=CDS]
Sequence

ATGAGTACAAAGTATAGAGACTTAACTGCAAATTCACAACTGGCATTTACAGTTTGGGAT
GTTTCTTGTGGGAAAGGTGAGGGATTGATTGGTGGGGCGACCATTCATCTCTTCAACATG
AAAAAGCAGCTAAAGACAGGAAAGCATAAGCTTAGGCTTTGGTCAGGCAAAGAGGCAGAT
GGATCCATTAATACAACTACACCTGGAAAGGTCCCCAAGGAAGAACGTGGGGAGTTGGAG
CGTTTGGAAAAACTGGTCAATAAGTACGAGAGGGGGCAGATTCAGCGAGTTGATTGGCTG
GACCGCCTTGCATTTAAAGCTATGGAGAAAATTAAGGAGTCTGAAAATAGTCAAAATGGA
AGTTCTCATTTATATCTGGTTATTGATTTTTGCAGTTTTGAACACCGAGTTGTCTTCCAG
GAATCAGGAGCAAACTTCTTATTACCGTCGCCTATTGCTTCAACGAATGAACTGGTTACC
GTCTACGATCCAGAGGTGGGAAAAATAAATCCCTCTGAGCACAAACAACTAAAGCTTGCT
AGGAGCTTAAATCGTGGCATCATTGACCGAGATCTTAAACCAAGTTCTACAGAAAGAAAG
TCAATACAAAGAATTTTGAAGTACCCTCCAACGATAAATTTGAGTGGAGACGAGAGGCAG
CTGCTTTGGAAATTCCGTTTTTCCTTGATGTCTGAGAAACGGGCTCTGACTAAGTTTCTT
CGATGTGTTGAATGGAGCGATGTCCAGGAAGCAAAGCAAGCCTTAGAACTGATGCACAAG
TGGGAATCAATTGACTTATGTGATGCATTGGAGCTTTTATCTCCCGTCTTTGAGAGTGAA
GAGGTCCGTGCCTATGCCGTTAGCGTTCTTGAAAGAGCTGATGATGAAGAGCTTCAGTGC
TACCTCCTTCAGTTGGTTCAAGCTCTTCGTTTTGAGCGCTCGGACAAATCTCGCCTTTCT
CATTTCCTTGTGCAACGGTCATTAAGGAATGTTGAGTTGGCAAGCTTTCTCCGGTGGTTT
GTAGCAGTGGAACTTCATGATCCTGCATATGCAAAACGCTTTTATTGTACCTATGAGATT
CTGGAAGAAAGCATGTTGAAGTTGGGGGCTGGTGCAAGTGGAGATGAAGATGGCTTTAAG
TTGTGGCAGAGCTTAGTGCGCCAGACTGAATTGACTGCTCAGTTATGCTCTATAATGAGA
GATGTAAGAAATGTCCGTGGTGGCACACAAAAGAAGATTGAAAAGCTTAGACATCTTCTG
TCTGGCCTCCTCAGCGAGCTCACTTATTTTGACGAGCCGATTCGGTCTCCTCTTGCCCCT
GATCTATTGATCACAGGGATCATCCCGTCAGAGTCTTCAATATTTAAAAGTGCATTACAT
CCATTACGGTTGGCATTTCGAACAGCAAATGGTGGATGTTGCAAGATCATATTTAAAAAA
GGAGATGATCTTCGACAAGATCAGCTGGTTGTCCAAATGGTATCACTTATGGATCGATTG
CTCAAATTGGAGAACCTTGATTTGCATTTGACTCCATACAGAGTATTGGCAACTGGACAT
GATGAGGGCATGCTGGAATTTATCCCCTCTAAGCCGTTGGCACAGATTATTTCAGAACAT
CGAAGCATTGTAAGCTACTTGCAGAAGTTTCATCCTGATGAAAATGGACCATTTGGTATT
ACATCTACATGTCTTGAGACATTTATAAAAAGCTGTGCTGGTTACTCCGTCATCACGTAC
ATATTGGGCATCGGGGACAGGCATCTTGACAATCTTCTGCTAAGAGATGATGGGCGCCTT
TTCCATGTTGATTTTGGTTTCATTTTAGGTCGAGATCCTAAGCCCTTTCCACCGCCCATG
AAGCTTTGCAAAGAAATGGTTGAAGCTATGGGTGGAGCAGAAAGCCAGTACTACACCAGG
TTCAAATCCTATTGTTGTGAAGCATACAACATTCTCCGAAAATCAAGCAACCTCATATTA
AATTTGTTTCATTTGATGGCCGGTTCCAATATTCCTGACATAGCTTCTGATCCTGAGAAG
GGCATTCTTAAGCTTCAAGAGAAGTTTCGGTTAGACTTGGACGACGAGGAATGCATTCAC
TTCTTTCAGGATCTTATTAATGAAAGTGTCAGTGCATTATTTCCACAAATGGTTGAGACA
ATTCACCGTTGGGCCCAGTACTGGCGTTGA

Peptide Sequence

PEP ID

XP_016473481.1
PEP Infomation

PREDICTED: phosphatidylinositol 3-kinase, root isoform isoform X2 [Nicotiana tabacum]
Sequence

MSTKYRDLTANSQLAFTVWDVSCGKGEGLIGGATIHLFNMKKQLKTGKHKLRLWSGKEAD
GSINTTTPGKVPKEERGELERLEKLVNKYERGQIQRVDWLDRLAFKAMEKIKESENSQNG
SSHLYLVIDFCSFEHRVVFQESGANFLLPSPIASTNELVTVYDPEVGKINPSEHKQLKLA
RSLNRGIIDRDLKPSSTERKSIQRILKYPPTINLSGDERQLLWKFRFSLMSEKRALTKFL
RCVEWSDVQEAKQALELMHKWESIDLCDALELLSPVFESEEVRAYAVSVLERADDEELQC
YLLQLVQALRFERSDKSRLSHFLVQRSLRNVELASFLRWFVAVELHDPAYAKRFYCTYEI
LEESMLKLGAGASGDEDGFKLWQSLVRQTELTAQLCSIMRDVRNVRGGTQKKIEKLRHLL
SGLLSELTYFDEPIRSPLAPDLLITGIIPSESSIFKSALHPLRLAFRTANGGCCKIIFKK
GDDLRQDQLVVQMVSLMDRLLKLENLDLHLTPYRVLATGHDEGMLEFIPSKPLAQIISEH
RSIVSYLQKFHPDENGPFGITSTCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRL
FHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLIL
NLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEECIHFFQDLINESVSALFPQMVET
IHRWAQYWR

Transcript Sequence

Gene sequence data has not been registered.